He is known for his ability to successfully marry traditional imagery with the zeitgeist of contemporary painting, in a skillful blend of an urbane self-awareness and a highly localized Bengali influence. His early works show an attention to figuration that carries through in his current pieces. In an interview, Chowdhury commented that, in his early works, "the space projected a simple iconic presence. A spatial sequence was worked out but the space was not complex. The background seemed to vanish."

During his college days, Chowdhury took part in leftist literary circles, the members of which dismissed Rabindranath Tagore as a bourgeoisie and became interested in the works of Russian authors. But by and large, Chowdhury kept himself apart from cultural movements: though friends with members of the Hungry Generation, his imagery was drawn from his cultural background more than his intellectual milieu.

His life in Calcutta was quite disturbed with political movements This has a definite influence on his works like the Ganesha period. The Bengali business class worshipping the icon, and their corruption, how they degenerate just like the flesh. The famine, the Partition, and the food movement all cast a pall over his formative years, and a quality of darkness may be seen to inhere in Chowdhury's work. Yet as well as an indicator of sadness, this darkness can be understood to evoke an aura of mystery. It is an effect enhanced in Chowdhury's more recent works, which, increasingly, crop the central image. Chowdhury explains that "The purpose is to hide some parts. The moment I show the entire figure, the interest in the details would be lost Earlier on the figures were observed in their natural bearings which came through expressionistic stylization and the weight of reality was greater There is an effect of distancing today."

Speaking on contemporary art, Chowdhury maintains the necessity of a uniquely Indian approach to art, as opposed to the blind aping of the Western trends of installations et al. "To be global you do not have to do something that is imitative of America, Australia or England. It has to have an authenticity, which is not what blind imitation allows for."

Jogen lives & works in Shantiniketan.